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Singh, Ashutosh
- Molecular Phylogeny of Rediscovered Travancore Flying Squirrel (Petinomys fuscocapillus) and its Conservation Implications
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Authors
Affiliations
1 Molecular Systematic Laboratory, Northern Regional Centre, Zoological Survey of India, 218, Kaulagarh Road, Dehradun 248 195, IN
1 Molecular Systematic Laboratory, Northern Regional Centre, Zoological Survey of India, 218, Kaulagarh Road, Dehradun 248 195, IN
Source
Current Science, Vol 110, No 4 (2016), Pagination: 659-666Abstract
Petinomys fuscocapillus (Travancore flying squirrel), Jerdon 1847, is a near threatened species, native to India and Sri Lanka. Deforestation, wood plantation, infrastructure development, poaching and natural predators are major threats to the species. This study reports for the first time the molecular phylogenetic position and level of genetic divergence of P. fuscocapillus among the flying squirrel species of South and Southeast Asia, based on two mitochondrial genes. The phylogenetic analysis confirms that the P. fuscocapillus and Petinomys setosus (Temminck's flying squirrel) are sister taxa and share most recent common ancestry. Phylogenetic position of other flying squirrels obtained in the present study was also supported by the previous studies. We also emphasize on the extensive survey for population sampling, need for plantations to maintain a continuous canopy and enforcement of strict laws at the potential geographical distribution of the species in two countries.Keywords
Conservation, Molecular Phylogeny, Petinomys fuscocapillus.Full Text
References
- Crowley, B., Extinction and rediscovery: where the wild things are. J. Biogeogr., 2011, 38, 1633-1634.
- Ladle, R. J., Jepson, P., Malhado, A. C. M., Jennings, S. and Barua, M., The causes and biogeographical significance of species rediscovery. Front. Biogeogr., 2011, 3, 111-117.
- Scheffers, B. R., Yong, D. L., Harris, J. B. C., Giam, X. and Sodhi, N. S., The world’s rediscovered species: back from the brink? PLoS ONE, 2011, 6(7), e22531.
- Fisher, D. O., Cost, effort and outcome of mammal rediscovery: neglect of small species. Biol. Conserv., 2011, 144, 1712-1718.
- Fisher, D. O. and Blomberg, S. P., Correlates of rediscovery and the detectability of extinction in mammals. Proc. R. Soc. Lond. Series B, Biol. Sci., 2011, 278, 1090-1097.
- Jackson, S. M. and Thorington Jr, R. W., Gliding Mammals: Taxonomy of living and extinct species. Smithsonian Institution Scholarly Press, Smithsonian Contribution to Zoology, 2012, p. 638.
- Kurup, G. U., Rediscovery of the small Travancore flying squirrel.Oryx, 1989, 23, 2-3.
- Jayasekara, P., Weerasinghe, U. R., Wijesundara, S. and Takatsuki, S., Identifying diurnal and nocturnal frugivores in the terrestrial and arboreal layers of a tropical rain forest in Sri Lanka. Ecotropica, 2007, 13, 7-15.
- Hutton, A. F., Notes on the snakes and mammals of the High Wavy Mountains, Madurai district, South India, Part II-Mammals.J. Bom. Nat. Hist. Soc., 1949, 48, 681-894.
- Ashraf, N. V. K., Kumar, A. and Johnsingh, A. J. T., On the relative abundance of two sympatric squirrels of Western Ghats, India. J. Bom. Nat. Hist. Soc., 1993, 90, 158-162.
- Sridhar, H., Raman, T. R. S. and Mudappa, D., Mammal persistence and abundance in tropical rainforest remnants in the southern Western Ghats, India. Curr. Sci., 2008, 94, 748-757.
- Umapathy, G. and Kumar, A., The occurrence of arboreal mammals in rainforest fragments in the Anamalai Hills, South India.Biol. Conserv., 2000, 92, 311-319.
- Wroughton, R. C., Summary of the results from the Indian Mammal Survey of the BNHS. J. Bom. Nat. Hist. Soc., 1919, 26, 338- 379.
- Bambaradeniya, C. N. B., Fauna of Sri Lanka: Status of Taxonomy, Research and Conservation, The World Conservation Union and Government of Sri Lanka, Colombo, 2006.
- Molur, S., Srinivasulu, C., Srinivasulu, B., Walker, S., Nameer, P.O. and Ravikumar, L., Status of South Asian non-volant small mammals: conservation assessment and management plan (C.A.M.P.) Workshop Report. Zoo Outreach Organisation/CBSGSouth Asia, Coimbatore, India, 2005.
- Kumara, H. N. and Suganthasakthivel, R., Predicting the potential distribution of Travancore flying squirrel Petinomys fuscocapillus in peninsular India and Sri Lanka using GARP and its conservation.Trop. Conserv. Sci., 2011, 4(2), 172-186.
- Koprowski, J. L. and Nandini, R., Global hotspot and knowledge gaps for tree and flying squirrels. Curr. Sci., 2008, 95(7), 857- 865.
- IUCN, 2008 IUCN Red List of Threatened Species. Petinomys fuscocapillus, http://www.iucnredlist.org; 7 January 2015.
- Gonzalez, J., Phylogenetic position of the most endangered Chilean bird: the Masafuera Rayadito (Aphrastura masafuerae; Furnariidae). Trop. Conserv. Sci., 2014, 7(4), 677-689.
- Jowers, M. J., Caut, S., Garcia-Mudarra, J. L., Alasaad, S. and Ineich, I., Molecular phylogenetics of the possibly extinct Martinique ground snake. Herpetologica, 2013, 69, 227-236.
- Barros, N. D. M. and Morgante, J. S., A simple protocol for the extraction and sequence analysis of DNA from study skin of museum collections. Genet. Mol. Biol., 2007, 30(4), 1181-1185.
- Kocher, T. D., Thomas, W. K., Meyer, A., Edwards, S. V., Paabo, S., Villablanca, F. X. and Wilson, A. C., Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers. Proc. Natl. Acad. Sci., 1989, 86, 6196- 6200.
- Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. and Kumar, S., MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol., 2011, 28, 2731-2739.
- Thompson, J. D., Higgins, D. G. and Gibson, T. J., CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucl. Acids Res., 1994, 22, 4673-4680.
- Kimura, M., A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol., 1980, 16, 111-120.
- Stamatakis, A., RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics, 2006, 22, 2688-2690.
- Silvestro, D. and Michalak, I., raxmlGUI: a graphical front-end for RaxML. Org. Div. Evol., 2011, 12(4), 335-337.
- Ronquist, F. et al., MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst. Biol., 2012, 61, 539-542.
- Darriba, D., Taboada, G. L., Doallo, R. and Posada, D., jModelTest 2: more models, new heuristics and parallel computing. Nat.Meth., 2012, 9, 772.
- Huelsenbeck, J. P. and Rannala, B., Frequentist properties of Bayesian posterior probabilities of phylogenetic trees under simple and complex substitution models. Syst. Biol., 2004, 53, 904-913.
- Lecocq, T. et al., Patterns of genetic and reproductive traits differentiation in mainland vs Corsican populations of bumblebees.PLoS ONE, 2013, 8(6), e65642.
- Yang, Z., Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods. J. Mol. Evol., 1994, 39, 306-314.
- Rambaut, A. and Drummond, A. J., Tracer v1.5; http:// beast.bio.ed.ac.uk/Tracer, 2007.
- Oshida, T., Masuda, R. and Yoshida, M. C., Phylogenetic relationships among Japanese species of the family Sciuridae (Mammalia, Rodentia), inferred from nucleotide sequences of mitochondrial 12S ribosomal RNA genes. Zool. Sci., 1996, 13, 615-620.
- Mein, P., Les Sciuropteres (Mammalia, Rodentia) Neogenes d'Europe Occidentale. Geobios (Lyon), 1970, 3, 7-77.
- Black, C. C., Holarctic evolution and dispersal of squirrels (Rodentia: Sciuridae). Evol. Biol., 1972, 6, 305-322.
- De Bruijn, H., Superfamily Sciuroidea. In The Miocene land mammals of Europe (eds Rösner, G. E. and Heissing, K.), Verlag Dr. Friedrich Pfeil, Müchen, 1999, pp. 271-280.
- Oshida, T., Lin, L.-K., Yanagawa, H., Endo, H. and Masuda, R., Phylogenetic relationships among six flying squirrel genera, inferred from mitochondrial cytochrome b gene sequences. Zool.Sci., 2000, 17, 485-489.
- Allen, G. M., The Mammals of China and Mongolia, American Museum of Natural History, New York, 1940.
- Corbet, G. B. and Hill, J. E., The Mammals of the Indomalayan Region: A Systematic Review, Oxford University Press, Oxford, 1992.
- Hoffmann, R. S., Anderson, C. G., Thorington Jr, R. W. and Heaney, L. R., Family Sciuridae, Mammal Species of the World: A Taxonomic and Geographic Reference (eds Wilson, D. E. and Reeder, D. M.), 2nd ed., Smithsonian Institution Press, Washington DC, 1993.
- Thorington Jr, R. W. and Hoffmann, R. S., Family Sciuridae, Mammal Species of the World: A Taxonomic and Geographic Reference (eds Wilson, D. E. and Reeder, D. M.), 3nd edn, Washington DC, The Johns Hopkins University Press, 2005.
- Li, S., He, K., Yu, F.-H. and Yang, Q.-S., Molecular phylogeny and biogeography of Petaurista inferred from the cytochrome b gene, with implications for the taxonomic status of P. caniceps, P.marica and P. sybilla. PLoS ONE, 2013, 8(7), e70461.
- Thorington Jr, R. W., Pitassy, D. and Jansa, S. A., Phylogenies of flying squirrels (Pteromyinae). J. Mammalian Evol., 2002, 9, 99-135.
- Mercer, J. M. and Roth, V. L., The effects of Cenozoic global change on squirrel phylogeny. Science, 2003, 299, 1568-1572.
- Oshida, T., Shafique, C. M., Barkati, S., Fujita, Y., Lin, L.-K. and Masuda, R., A preliminary study on molecular phylogeny of giant flying squirrels, genus Petaurista (Rodentia, Sciuridae) based on mitochondrial cytochrome b gene sequences. Rus. J. Theriol., 2004, 3(1), 15-24.
- Yu, F. et al., Molecular phylogeny and biogeography of woolly flying squirrel (Rodentia: Sciuridae), inferred from mitochondrial cytochrome b gene sequences. Mol. Phylogenet. Evol., 2004, 33, 735-744.
- Mani, M. S., Ecology and Biogeography in India, Dr W. Junk b.v. Publishers the Hague, 1974.
- Herron, M. D., Castoe, T. A. and Parkinson, C. L., Sciurid phylogeny and the paraphyly of holarctic ground squirrels (Spermophilus). Mol. Phylogenetic Evol., 2004, 31, 1015-1030.
- Umapathy, G., Impacts of habitat fragmentation on the arboreal mammals in the wet evergreen forests of the Anaimalai hills in the Western Ghats, South India, Ph D thesis, Bharathiar University, Coimbatore, India, 1998.
- Karanth, K. U., Status of wildlife and habitat conservation in Karnataka. J. Bom. Nat. Hist. Soc., 1986, 83, 166-179.
- Kumara, H. N. and Singh, M., New site record of small Travancore flying squirrel (Petinomys fuscocapillus fuscocapillus) from Karnataka. J. Bom. Nat. Hist. Soc., 2005, 102, 97-98.
- Nanayakkara, R. P., Vishvanath, N. and Kusuminda, T. G. T., The small flying squirrel (Petinomys fuscocapillus) observed after 78 years in Sri Lanka. Taprobanica, 2013, 5, 85-86.
- M. S. Srinivasan (1938–2021)
Abstract Views :177 |
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Authors
Affiliations
1 Department of Geology, Institute of Science, Banaras Hindu University, Varanasi 221 005, IN
2 Department of Geology, Delhi University, New Delhi 110 007, (formerly at Department of Geology, Banaras Hindu University), IN
1 Department of Geology, Institute of Science, Banaras Hindu University, Varanasi 221 005, IN
2 Department of Geology, Delhi University, New Delhi 110 007, (formerly at Department of Geology, Banaras Hindu University), IN
Source
Current Science, Vol 120, No 10 (2021), Pagination: 1642-1642Abstract
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